IL_7A5I_093

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_093 not in the Motif Atlas

Geometric match to IL_3GM7_003

Geometric discrepancy: 0.0971

The information below is about IL_3GM7_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7A5I|1|A6|G|1493
7A5I|1|A6|U|1494
7A5I|1|A6|C|1495
*
7A5I|1|A6|G|1563
7A5I|1|A6|U|1564
7A5I|1|A6|C|1565

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain X

Transfer RNA; tRNA

Chain d6

Aurora kinase A-interacting protein

Chain i4

mRNA