3D structure

PDB id
7A5J (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GCA*UCAAUUGAUCCAAUAACUUGACCAAC
Length
29 nucleotides
Bulged bases
7A5J|1|A|A|2914
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5J|1|A|G|2846
7A5J|1|A|C|2847
7A5J|1|A|A|2848
*
7A5J|1|A|U|2890
7A5J|1|A|C|2891
7A5J|1|A|A|2892
7A5J|1|A|A|2893
7A5J|1|A|U|2894
7A5J|1|A|U|2895
7A5J|1|A|G|2896
7A5J|1|A|A|2897
7A5J|1|A|U|2898
7A5J|1|A|C|2899
7A5J|1|A|C|2900
7A5J|1|A|A|2901
7A5J|1|A|A|2902
7A5J|1|A|U|2903
7A5J|1|A|A|2904
7A5J|1|A|A|2905
7A5J|1|A|C|2906
7A5J|1|A|U|2907
7A5J|1|A|U|2908
7A5J|1|A|G|2909
7A5J|1|A|A|2910
7A5J|1|A|C|2911
7A5J|1|A|C|2912
7A5J|1|A|A|2913
7A5J|1|A|A|2914
7A5J|1|A|C|2915

Current chains

Chain A
16S rRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial
Chain x
Transfer RNA; tRNA

Coloring options:

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