IL_7A5K_074

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAACU*ACUAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_074 not in the Motif Atlas

Homologous match to IL_5J7L_037

Geometric discrepancy: 0.1582

The information below is about IL_5J7L_037

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7A5K|1|A6|A|1071
7A5K|1|A6|A|1072
7A5K|1|A6|A|1073
7A5K|1|A6|C|1074
7A5K|1|A6|U|1075
*
7A5K|1|A6|A|1091
7A5K|1|A6|C|1092
7A5K|1|A6|U|1093
7A5K|1|A6|A|1094
7A5K|1|A6|U|1095

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain I6

28S ribosomal protein S11, mitochondrial

Chain Q6

28S ribosomal protein S21, mitochondrial