IL_7A5K_078

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGU*GC

Length

5 nucleotides

Bulged bases

7A5K|1|A6|G|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_078 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.3881

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

7A5K|1|A6|G|1182
7A5K|1|A6|G|1183
7A5K|1|A6|U|1184
*
7A5K|1|A6|G|1478
7A5K|1|A6|C|1479

Current chains

Chain A6

12S rRNA

Nearby chains

Chain 8

Large subunit ribosomal RNA; LSU rRNA

Chain c6

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1