IL_7A5K_082

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCU*AG

Length

5 nucleotides

Bulged bases

7A5K|1|A6|C|1258

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_082 not in the Motif Atlas

Homologous match to IL_5J7L_046

Geometric discrepancy: 0.311

The information below is about IL_5J7L_046

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7A5K|1|A6|C|1257
7A5K|1|A6|C|1258
7A5K|1|A6|U|1259
*
7A5K|1|A6|A|1342
7A5K|1|A6|G|1343

Current chains

Chain A6

12S rRNA

Nearby chains

Chain K6

28S ribosomal protein S14, mitochondrial

Chain Z6

28S ribosomal protein S33, mitochondrial