3D structure

PDB id
7ABI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human pre-Bact-2 spliceosome
Experimental method
ELECTRON MICROSCOPY
Resolution
8 Å

Loop

Sequence
CUGGU*ACAACUCUG
Length
14 nucleotides
Bulged bases
7ABI|1|5|C|68
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ABI|1|5|C|6
7ABI|1|5|U|7
7ABI|1|5|G|8
7ABI|1|5|G|9
7ABI|1|5|U|10
*
7ABI|1|5|A|67
7ABI|1|5|C|68
7ABI|1|5|A|69
7ABI|1|5|A|70
7ABI|1|5|C|71
7ABI|1|5|U|72
7ABI|1|5|C|73
7ABI|1|5|U|74
7ABI|1|5|G|75

Current chains

Chain 5
U5 snRNA

Nearby chains

Chain A
Pre-mRNA-processing-splicing factor 8
Chain D
U5 small nuclear ribonucleoprotein 40 kDa protein
Chain Q
Protein BUD31 homolog
Chain r
116 kDa U5 small nuclear ribonucleoprotein component

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1364 s