IL_7ABI_007

3D structure

PDB id

7ABI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-Bact-2 spliceosome

Experimental method

ELECTRON MICROSCOPY

Resolution

8 Å

Loop

Sequence

UCG*CA

Length

5 nucleotides

Bulged bases

7ABI|1|6|C|6

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ABI_007 not in the Motif Atlas

Geometric match to IL_1S03_006

Geometric discrepancy: 0.3251

The information below is about IL_1S03_006

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

7ABI|1|6|U|5
7ABI|1|6|C|6
7ABI|1|6|G|7
*
7ABI|1|6|C|14
7ABI|1|6|A|15

Current chains

Chain 6

U6 snRNA

Nearby chains