3D structure

PDB id
7ABI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human pre-Bact-2 spliceosome
Experimental method
ELECTRON MICROSCOPY
Resolution
8 Å

Loop

Sequence
UCCC*GAUGA
Length
9 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ABI|1|6|U|57
7ABI|1|6|C|60
7ABI|1|6|C|61
7ABI|1|6|C|62
*
7ABI|1|6|G|72
7ABI|1|6|A|73
7ABI|1|6|U|74
7ABI|1|6|G|75
7ABI|1|6|A|78

Current chains

Chain 6
U6 snRNA

Nearby chains

Chain 2
U2 splicesomal small nuclear RNA; U2 snRNA
Chain A
Pre-mRNA-processing-splicing factor 8
Chain G
Pleiotropic regulator 1
Chain O
Crooked neck-like protein 1
Chain Z
MINX M3 pre-mRNA
Chain v
SNW domain-containing protein 1

Coloring options:

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