IL_7AC7_053

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CGAAGG*UCUAAG

Length

12 nucleotides

Bulged bases

7AC7|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AC7_053 not in the Motif Atlas

Geometric match to IL_7RQB_107

Geometric discrepancy: 0.2125

The information below is about IL_7RQB_107

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.5

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7AC7|1|1|C|1417
7AC7|1|1|G|1418
7AC7|1|1|A|1419
7AC7|1|1|A|1420
7AC7|1|1|G|1421
7AC7|1|1|G|1422
*
7AC7|1|1|U|1576
7AC7|1|1|C|1577
7AC7|1|1|U|1578
7AC7|1|1|A|1579
7AC7|1|1|A|1580
7AC7|1|1|G|1581

Current chains

Chain 1

23S ribosomal RNA

Nearby chains