3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
ACUAGG*CUGU
Length
10 nucleotides
Bulged bases
7AC7|1|1|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7AC7_065 not in the Motif Atlas
Homologous match to IL_4WF9_065
Geometric discrepancy: 0.2012
The information below is about IL_4WF9_065
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_28217.1
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
10

Unit IDs

7AC7|1|1|A|1669
7AC7|1|1|C|1670
7AC7|1|1|U|1671
7AC7|1|1|A|1672
7AC7|1|1|G|1673
7AC7|1|1|G|1674
*
7AC7|1|1|C|1990
7AC7|1|1|U|1991
7AC7|1|1|G|1992
7AC7|1|1|U|1993

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain K
50S ribosomal protein L14

Coloring options:


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