IL_7AC7_101

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7AC7|1|1|A|2572, 7AC7|1|1|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AC7_101 not in the Motif Atlas

Geometric match to IL_7RQB_098

Geometric discrepancy: 0.0712

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7AC7|1|1|C|2512
7AC7|1|1|A|2513
*
7AC7|1|1|U|2571
7AC7|1|1|A|2572
7AC7|1|1|C|2573
7AC7|1|1|G|2574

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 4

Transfer-messenger RNA; tmRNA

Chain C

50S ribosomal protein L3

Chain J

50S ribosomal protein L13