IL_7AC7_190

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CGCU*AGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AC7_190 not in the Motif Atlas

Geometric match to IL_6DTD_001

Geometric discrepancy: 0.3302

The information below is about IL_6DTD_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_25872.4

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

5

Unit IDs

7AC7|1|4|C|107
7AC7|1|4|G|108
7AC7|1|4|C|109
7AC7|1|4|U|110
*
7AC7|1|4|A|133
7AC7|1|4|G|134
7AC7|1|4|A|135
7AC7|1|4|G|136

Current chains

Chain 4

transfer-messenger RNA (tmRNA)

Nearby chains