3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
UUGAAG*UGGAGGA
Length
13 nucleotides
Bulged bases
7AC7|1|1|G|729
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7AC7_194 not in the Motif Atlas
Geometric match to IL_4V88_462
Geometric discrepancy: 0.246
The information below is about IL_4V88_462
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_82488.1
Basepair signature
cWW-tSH-tSH-tHS-cWW-cWW
Number of instances in this motif group
7

Unit IDs

7AC7|1|1|U|702
7AC7|1|1|U|703
7AC7|1|1|G|704
7AC7|1|1|A|705
7AC7|1|1|A|706
7AC7|1|1|G|707
*
7AC7|1|1|U|724
7AC7|1|1|G|725
7AC7|1|1|G|726
7AC7|1|1|A|727
7AC7|1|1|G|728
7AC7|1|1|G|729
7AC7|1|1|A|730

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L2

Coloring options:


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