IL_7ACR_010

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_010 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4438

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7ACR|1|1|C|274
7ACR|1|1|C|275
7ACR|1|1|U|276
7ACR|1|1|G|277
7ACR|1|1|A|278
7ACR|1|1|A|279
7ACR|1|1|U|280
7ACR|1|1|C|281
*
7ACR|1|1|G|359
7ACR|1|1|U|360
7ACR|1|1|G|361
7ACR|1|1|A|362
7ACR|1|1|G|363

Current chains

Chain 1

23S ribosomal RNA

Nearby chains