IL_7ACR_127

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_127 not in the Motif Atlas

Homologous match to IL_5J7L_020

Geometric discrepancy: 0.2217

The information below is about IL_5J7L_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7ACR|1|2|U|409
7ACR|1|2|G|410
7ACR|1|2|A|411
7ACR|1|2|A|412
7ACR|1|2|G|413
7ACR|1|2|A|414
7ACR|1|2|A|415
7ACR|1|2|G|416
*
7ACR|1|2|U|427
7ACR|1|2|G|428
7ACR|1|2|U|429
7ACR|1|2|A|430
7ACR|1|2|A|431
7ACR|1|2|A|432
7ACR|1|2|G|433

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4