IL_7ACR_185

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UAAGC*GUGAUG

Length

11 nucleotides

Bulged bases

7ACR|1|1|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_185 not in the Motif Atlas

Homologous match to IL_4WF9_116

Geometric discrepancy: 0.2285

The information below is about IL_4WF9_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7ACR|1|1|U|1468
7ACR|1|1|A|1469
7ACR|1|1|A|1470
7ACR|1|1|G|1471
7ACR|1|1|C|1472
*
7ACR|1|1|G|1519
7ACR|1|1|U|1520
7ACR|1|1|G|1521
7ACR|1|1|A|1522
7ACR|1|1|U|1523
7ACR|1|1|G|1524

Current chains

Chain 1

23S ribosomal RNA

Nearby chains