IL_7ACR_198

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GAAGGGAG*CUCAUUGAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_198 not in the Motif Atlas

Homologous match to IL_6CZR_360

Geometric discrepancy: 0.4318

The information below is about IL_6CZR_360

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACR|1|2|G|450
7ACR|1|2|A|451
7ACR|1|2|A|452
7ACR|1|2|G|453
7ACR|1|2|G|454
7ACR|1|2|G|455
7ACR|1|2|A|456
7ACR|1|2|G|457
*
7ACR|1|2|C|475
7ACR|1|2|U|476
7ACR|1|2|C|477
7ACR|1|2|A|478
7ACR|1|2|U|479
7ACR|1|2|U|480
7ACR|1|2|G|481
7ACR|1|2|A|482
7ACR|1|2|C|483

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16