IL_7AFI_046
3D structure
- PDB id
- 7AFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state C (body domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- CGCAGG*CUCAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AFI_046 not in the Motif Atlas
- Geometric match to IL_8ZA4_001
- Geometric discrepancy: 0.2195
- The information below is about IL_8ZA4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AFI|1|A|C|580
7AFI|1|A|G|581
7AFI|1|A|C|582
7AFI|1|A|A|583
7AFI|1|A|G|584
7AFI|1|A|G|585
*
7AFI|1|A|C|756
7AFI|1|A|U|757
7AFI|1|A|C|758
7AFI|1|A|A|759
7AFI|1|A|G|760
7AFI|1|A|G|761
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
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