IL_7AS8_039
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 7AS8|1|A|A|1189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AS8_039 not in the Motif Atlas
- Homologous match to IL_4WF9_039
- Geometric discrepancy: 0.1123
- The information below is about IL_4WF9_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
7AS8|1|A|U|1064
7AS8|1|A|U|1065
7AS8|1|A|A|1066
7AS8|1|A|A|1067
7AS8|1|A|G|1068
7AS8|1|A|U|1069
7AS8|1|A|G|1070
*
7AS8|1|A|C|1186
7AS8|1|A|U|1187
7AS8|1|A|A|1188
7AS8|1|A|A|1189
7AS8|1|A|A|1190
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L6
- Chain N
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L36
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