IL_7AS8_069

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7AS8|1|A|G|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AS8_069 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.1034

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7AS8|1|A|C|1731
7AS8|1|A|G|1732
7AS8|1|A|U|1733
7AS8|1|A|A|1734
7AS8|1|A|A|1735
7AS8|1|A|C|1736
*
7AS8|1|A|G|1741
7AS8|1|A|G|1742
7AS8|1|A|A|1743
7AS8|1|A|G|1744
7AS8|1|A|A|1745
7AS8|1|A|A|1746
7AS8|1|A|G|1747

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L2