IL_7AS8_074
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UG*UAAA
- Length
- 6 nucleotides
- Bulged bases
- 7AS8|1|A|A|1928, 7AS8|1|A|A|1929
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AS8_074 not in the Motif Atlas
- Homologous match to IL_5J7L_315
- Geometric discrepancy: 0.1353
- The information below is about IL_5J7L_315
- Detailed Annotation
- Major groove intercalation
- Broad Annotation
- Major groove intercalation
- Motif group
- IL_82107.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
7AS8|1|A|U|1870
7AS8|1|A|G|1871
*
7AS8|1|A|U|1927
7AS8|1|A|A|1928
7AS8|1|A|A|1929
7AS8|1|A|A|1930
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- Uncharacterized protein YabO
- Chain E
- 50S ribosomal protein L2
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