IL_7ASM_018

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASM_018 not in the Motif Atlas

Homologous match to IL_7RQB_017

Geometric discrepancy: 0.0659

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7ASM|1|A|C|717
7ASM|1|A|C|718
7ASM|1|A|G|719
*
7ASM|1|A|C|851
7ASM|1|A|U|852
7ASM|1|A|G|853

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain J

50S ribosomal protein L15