IL_7ASM_027

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UAU*AUUA

Length

7 nucleotides

Bulged bases

7ASM|1|A|U|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASM_027 not in the Motif Atlas

Homologous match to IL_7A0S_026

Geometric discrepancy: 0.2921

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7ASM|1|A|U|896
7ASM|1|A|A|897
7ASM|1|A|U|898
*
7ASM|1|A|A|969
7ASM|1|A|U|970
7ASM|1|A|U|971
7ASM|1|A|A|972

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L27

Chain X

50S ribosomal protein L30