3D structure

PDB id
7ASM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 50S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
AUA*UU
Length
5 nucleotides
Bulged bases
7ASM|1|A|U|1056
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ASM_035 not in the Motif Atlas
Geometric match to IL_5J7L_279
Geometric discrepancy: 0.2311
The information below is about IL_5J7L_279
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

7ASM|1|A|A|1055
7ASM|1|A|U|1056
7ASM|1|A|A|1057
*
7ASM|1|A|U|1193
7ASM|1|A|U|1194

Current chains

Chain A
23S rRNA

Nearby chains

Chain H
50S ribosomal protein L13
Chain O
50S ribosomal protein L20

Coloring options:


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