IL_7ASM_090
3D structure
- PDB id
- 7ASM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASM_090 not in the Motif Atlas
- Homologous match to IL_4WF9_093
- Geometric discrepancy: 0.0926
- The information below is about IL_4WF9_093
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7ASM|1|A|C|2493
7ASM|1|A|C|2494
7ASM|1|A|A|2495
7ASM|1|A|A|2496
7ASM|1|A|G|2497
*
7ASM|1|A|C|2507
7ASM|1|A|G|2508
7ASM|1|A|A|2509
7ASM|1|A|C|2510
7ASM|1|A|G|2511
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain K
- 50S ribosomal protein L16
Coloring options: