IL_7ASM_109
3D structure
- PDB id
- 7ASM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASM_109 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.4107
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
7ASM|1|B|G|31
7ASM|1|B|U|32
7ASM|1|B|U|33
7ASM|1|B|C|34
7ASM|1|B|C|35
7ASM|1|B|C|36
*
7ASM|1|B|G|42
7ASM|1|B|A|43
7ASM|1|B|A|44
7ASM|1|B|C|45
7ASM|1|B|A|46
7ASM|1|B|C|47
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L18
Coloring options: