IL_7ASM_114

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CUAAG*UGAUGG

Length

11 nucleotides

Bulged bases

7ASM|1|A|G|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASM_114 not in the Motif Atlas

Homologous match to IL_4WF9_116

Geometric discrepancy: 0.2457

The information below is about IL_4WF9_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7ASM|1|A|C|1511
7ASM|1|A|U|1512
7ASM|1|A|A|1513
7ASM|1|A|A|1514
7ASM|1|A|G|1515
*
7ASM|1|A|U|1565
7ASM|1|A|G|1566
7ASM|1|A|A|1567
7ASM|1|A|U|1568
7ASM|1|A|G|1569
7ASM|1|A|G|1570

Current chains

Chain A

23S rRNA

Nearby chains