IL_7ASP_002
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GUGA*UGCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_002 not in the Motif Atlas
- Homologous match to IL_4WF9_110
- Geometric discrepancy: 0.1937
- The information below is about IL_4WF9_110
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7ASP|1|3|G|5
7ASP|1|3|U|6
7ASP|1|3|G|7
7ASP|1|3|A|8
*
7ASP|1|3|U|107
7ASP|1|3|G|108
7ASP|1|3|C|109
7ASP|1|3|C|110
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L18
Coloring options: