IL_7ASP_004
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AGGUCACA*UUAAGGU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_004 not in the Motif Atlas
- Homologous match to IL_4WF9_113
- Geometric discrepancy: 0.4855
- The information below is about IL_4WF9_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19048.1
- Basepair signature
- cWW-L-R-L-R-L-cSH-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ASP|1|3|A|20
7ASP|1|3|G|21
7ASP|1|3|G|22
7ASP|1|3|U|23
7ASP|1|3|C|24
7ASP|1|3|A|25
7ASP|1|3|C|26
7ASP|1|3|A|27
*
7ASP|1|3|U|53
7ASP|1|3|U|54
7ASP|1|3|A|55
7ASP|1|3|A|56
7ASP|1|3|G|57
7ASP|1|3|G|58
7ASP|1|3|U|59
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L18
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