IL_7ASP_015

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASP_015 not in the Motif Atlas

Homologous match to IL_6CZR_127

Geometric discrepancy: 0.3956

The information below is about IL_6CZR_127

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.2

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

7ASP|1|X|G|379
7ASP|1|X|C|380
7ASP|1|X|A|381
7ASP|1|X|A|382
7ASP|1|X|U|383
*
7ASP|1|X|A|397
7ASP|1|X|C|398

Current chains

Chain X

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S16