IL_7ASP_029

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASP_029 not in the Motif Atlas

Homologous match to IL_6CZR_164

Geometric discrepancy: 0.5809

The information below is about IL_6CZR_164

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|C|1314
7ASP|1|X|G|1315
7ASP|1|X|G|1316
7ASP|1|X|A|1317
7ASP|1|X|U|1318
7ASP|1|X|U|1319
*
7ASP|1|X|A|1340
7ASP|1|X|U|1341
7ASP|1|X|G|1342
7ASP|1|X|A|1343
7ASP|1|X|A|1344
7ASP|1|X|G|1345

Current chains

Chain X

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S13