IL_7ASP_040
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUUAGUAG*CGAAACG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_040 not in the Motif Atlas
- Homologous match to IL_4WF9_009
- Geometric discrepancy: 0.1212
- The information below is about IL_4WF9_009
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7ASP|1|Y|C|241
7ASP|1|Y|U|242
7ASP|1|Y|U|243
7ASP|1|Y|A|244
7ASP|1|Y|G|245
7ASP|1|Y|U|246
7ASP|1|Y|A|247
7ASP|1|Y|G|248
*
7ASP|1|Y|C|256
7ASP|1|Y|G|257
7ASP|1|Y|A|258
7ASP|1|Y|A|259
7ASP|1|Y|A|260
7ASP|1|Y|C|261
7ASP|1|Y|G|262
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain J
- 50S ribosomal protein L15
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