IL_7ASP_103

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

7ASP|1|Y|U|2429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASP_103 not in the Motif Atlas

Homologous match to IL_4WF9_088

Geometric discrepancy: 0.3128

The information below is about IL_4WF9_088

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7ASP|1|Y|U|2428
7ASP|1|Y|U|2429
7ASP|1|Y|C|2430
*
7ASP|1|Y|G|2441
7ASP|1|Y|G|2442

Current chains

Chain Y

23S rRNA

Nearby chains

Chain A

50S ribosomal protein L33,50S ribosomal protein L30

Chain J

50S ribosomal protein L15