Loop IL_7ASP

3D structure

PDB id: 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description: Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å

Loop

Sequence: GUGCAGAAGAGGAAAGUGGAAUU*AGGAACACCAGUGGCGAAGGCGACUUUCUGGUCUGUAAC
Length: 62 nucleotides
Bulged bases: 7ASP|1|X|A|673, 7ASP|1|X|A|677, 7ASP|1|X|A|723, 7ASP|1|X|U|731, 7ASP|1|X|A|736, 7ASP|1|X|C|740, 7ASP|1|X|G|741, 7ASP|1|X|U|748
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7ASP|1|X|G|664
7ASP|1|X|U|665
7ASP|1|X|G|666
7ASP|1|X|C|667
7ASP|1|X|A|668
7ASP|1|X|G|669
7ASP|1|X|A|670
7ASP|1|X|A|671
7ASP|1|X|G|672
7ASP|1|X|A|673
7ASP|1|X|G|674
7ASP|1|X|G|675
7ASP|1|X|A|676
7ASP|1|X|A|677
7ASP|1|X|A|678
7ASP|1|X|G|679
7ASP|1|X|U|680
7ASP|1|X|G|681
7ASP|1|X|G|682
7ASP|1|X|A|683
7ASP|1|X|A|684
7ASP|1|X|U|685
7ASP|1|X|U|686
*
7ASP|1|X|A|720
7ASP|1|X|G|721
7ASP|1|X|G|722
7ASP|1|X|A|723
7ASP|1|X|A|724
7ASP|1|X|C|725
7ASP|1|X|A|726
7ASP|1|X|C|727
7ASP|1|X|C|728
7ASP|1|X|A|729
7ASP|1|X|G|730
7ASP|1|X|U|731
7ASP|1|X|G|732
7ASP|1|X|G|733
7ASP|1|X|C|734
7ASP|1|X|G|735
7ASP|1|X|A|736
7ASP|1|X|A|737
7ASP|1|X|G|738
7ASP|1|X|G|739
7ASP|1|X|C|740
7ASP|1|X|G|741
7ASP|1|X|A|742
7ASP|1|X|C|743
7ASP|1|X|U|744
7ASP|1|X|U|745
7ASP|1|X|U|746
7ASP|1|X|C|747
7ASP|1|X|U|748
7ASP|1|X|G|749
7ASP|1|X|G|750
7ASP|1|X|U|751
7ASP|1|X|C|752
7ASP|1|X|U|753
7ASP|1|X|G|754
7ASP|1|X|U|755
7ASP|1|X|A|756
7ASP|1|X|A|757
7ASP|1|X|C|758

Current chains

Chain X: 16S rRNA

Nearby chains

Chain b: 30S ribosomal protein S11
Chain f: 30S ribosomal protein S15
Chain i: 30S ribosomal protein S18
Chain n: 30S ribosomal protein S6

IL_7ASP_148