IL_7ASP_149

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UCCAUGUGUAGC*GCGCAGAGAUAUGGA

Length

27 nucleotides

Bulged bases

7ASP|1|X|U|692, 7ASP|1|X|A|695, 7ASP|1|X|C|709, 7ASP|1|X|A|710, 7ASP|1|X|A|716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|U|686
7ASP|1|X|C|687
7ASP|1|X|C|688
7ASP|1|X|A|689
7ASP|1|X|U|690
7ASP|1|X|G|691
7ASP|1|X|U|692
7ASP|1|X|G|693
7ASP|1|X|U|694
7ASP|1|X|A|695
7ASP|1|X|G|696
7ASP|1|X|C|697
*
7ASP|1|X|G|706
7ASP|1|X|C|707
7ASP|1|X|G|708
7ASP|1|X|C|709
7ASP|1|X|A|710
7ASP|1|X|G|711
7ASP|1|X|A|712
7ASP|1|X|G|713
7ASP|1|X|A|714
7ASP|1|X|U|715
7ASP|1|X|A|716
7ASP|1|X|U|717
7ASP|1|X|G|718
7ASP|1|X|G|719
7ASP|1|X|A|720

Current chains

Chain X

16S rRNA

Nearby chains

Chain Y

Large subunit ribosomal RNA; LSU rRNA

Chain b

30S ribosomal protein S11