IL_7AZS_007

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAC*GG

Length

6 nucleotides

Bulged bases

7AZS|1|16SA|G|769, 7AZS|1|16SA|A|770

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_007 not in the Motif Atlas

Homologous match to IL_4LFB_007

Geometric discrepancy: 0.1194

The information below is about IL_4LFB_007

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_75289.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7AZS|1|16SA|U|768
7AZS|1|16SA|G|769
7AZS|1|16SA|A|770
7AZS|1|16SA|C|771
*
7AZS|1|16SA|G|872
7AZS|1|16SA|G|873

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S16A

30S ribosomal protein S16

Chain S17A

30S ribosomal protein S17

Chain S20A

30S ribosomal protein S20