IL_7AZS_042
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7AZS|1|16SA|C|1682
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_042 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.0949
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SA|U|1680
7AZS|1|16SA|G|1681
7AZS|1|16SA|C|1682
7AZS|1|16SA|A|1683
7AZS|1|16SA|U|1684
*
7AZS|1|16SA|A|1831
7AZS|1|16SA|U|1832
7AZS|1|16SA|G|1833
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ASIA
- Transfer RNA; tRNA
- Chain MRNA
- mRNA
- Chain S10A
- 30S ribosomal protein S10
- Chain S14A
- 30S ribosomal protein S14 type Z
- Chain S3A
- 30S ribosomal protein S3
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