IL_7AZS_055
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_055 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.2153
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AZS|1|16SA|G|2033
7AZS|1|16SA|U|2034
7AZS|1|16SA|5MC|2035
7AZS|1|16SA|A|2036
7AZS|1|16SA|C|2037
*
7AZS|1|16SA|G|2114
7AZS|1|16SA|A|2115
7AZS|1|16SA|A|2116
7AZS|1|16SA|G|2117
7AZS|1|16SA|U|2118
7AZS|1|16SA|C|2119
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain ASIA
- Transfer RNA; tRNA
- Chain MRNA
- mRNA
- Chain S12A
- 30S ribosomal protein S12
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