IL_7AZS_105
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 7AZS|1|16SB|U|1823
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_105 not in the Motif Atlas
- Geometric match to IL_4LFB_046
- Geometric discrepancy: 0.2509
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
7AZS|1|16SB|C|1688
7AZS|1|16SB|G|1689
*
7AZS|1|16SB|C|1822
7AZS|1|16SB|U|1823
7AZS|1|16SB|G|1824
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ASIB
- Transfer RNA; tRNA
- Chain MRNB
- mRNA
- Chain S10B
- 30S ribosomal protein S10
- Chain S14B
- 30S ribosomal protein S14 type Z
- Chain S3B
- 30S ribosomal protein S3
- Chain S5B
- 30S ribosomal protein S5
- Chain S9B
- 30S ribosomal protein S9
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