IL_7AZS_145

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

7AZS|1|23SA|G|979

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_145 not in the Motif Atlas

Geometric match to IL_7RQB_025

Geometric discrepancy: 0.3003

The information below is about IL_7RQB_025

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

7AZS|1|23SA|C|893
7AZS|1|23SA|G|894
7AZS|1|23SA|C|895
*
7AZS|1|23SA|G|978
7AZS|1|23SA|G|979
7AZS|1|23SA|A|980
7AZS|1|23SA|G|981

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L30A

50S ribosomal protein L30