IL_7AZS_146

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGAC*GGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_146 not in the Motif Atlas

Geometric match to IL_7RQB_026

Geometric discrepancy: 0.1039

The information below is about IL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94165.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

7AZS|1|23SA|C|895
7AZS|1|23SA|U|896
7AZS|1|23SA|G|897
7AZS|1|23SA|A|898
7AZS|1|23SA|C|899
*
7AZS|1|23SA|G|975
7AZS|1|23SA|G|976
7AZS|1|23SA|U|977
7AZS|1|23SA|G|978

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L30A

50S ribosomal protein L30