IL_7AZS_203

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

7AZS|1|23SA|A|2151, 7AZS|1|23SA|U|2192, 7AZS|1|23SA|G|2193, 7AZS|1|23SA|A|2194, 7AZS|1|23SA|A|2195, 7AZS|1|23SA|A|2196, 7AZS|1|23SA|U|2197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZS|1|23SA|G|2149
7AZS|1|23SA|G|2150
7AZS|1|23SA|A|2151
7AZS|1|23SA|G|2152
*
7AZS|1|23SA|C|2186
7AZS|1|23SA|G|2187
7AZS|1|23SA|C|2188
7AZS|1|23SA|C|2189
7AZS|1|23SA|G|2190
7AZS|1|23SA|G|2191
7AZS|1|23SA|U|2192
7AZS|1|23SA|G|2193
7AZS|1|23SA|A|2194
7AZS|1|23SA|A|2195
7AZS|1|23SA|A|2196
7AZS|1|23SA|U|2197
7AZS|1|23SA|A|2198
7AZS|1|23SA|C|2199

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain ESIA

Transfer RNA; tRNA