IL_7AZS_233
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_233 not in the Motif Atlas
- Geometric match to IL_7RQB_006
- Geometric discrepancy: 0.058
- The information below is about IL_7RQB_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7AZS|1|23SB|G|178
7AZS|1|23SB|G|179
7AZS|1|23SB|A|180
7AZS|1|23SB|A|181
7AZS|1|23SB|C|182
7AZS|1|23SB|U|183
7AZS|1|23SB|G|184
*
7AZS|1|23SB|C|191
7AZS|1|23SB|U|192
7AZS|1|23SB|C|193
7AZS|1|23SB|A|194
7AZS|1|23SB|G|195
7AZS|1|23SB|U|196
7AZS|1|23SB|A|197
7AZS|1|23SB|C|198
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L15B
- 50S ribosomal protein L15
- Chain L28B
- 50S ribosomal protein L28
- Chain L34B
- 50S ribosomal protein L34
- Chain L35B
- 50S ribosomal protein L35
Coloring options: