IL_7AZS_241

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_241 not in the Motif Atlas

Geometric match to IL_7RQB_015

Geometric discrepancy: 0.0641

The information below is about IL_7RQB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7AZS|1|23SB|C|589
7AZS|1|23SB|C|590
7AZS|1|23SB|U|591
*
7AZS|1|23SB|A|600
7AZS|1|23SB|U|601
7AZS|1|23SB|G|602

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L15B

50S ribosomal protein L15

Chain L20B

50S ribosomal protein L20

Chain L21B

50S ribosomal protein L21

Chain L32B

50S ribosomal protein L32