IL_7AZS_249
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 7AZS|1|23SB|G|825, 7AZS|1|23SB|A|837, 7AZS|1|23SB|A|838, 7AZS|1|23SB|C|839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_249 not in the Motif Atlas
- Geometric match to IL_7RQB_023
- Geometric discrepancy: 0.0434
- The information below is about IL_7RQB_023
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.6
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZS|1|23SB|G|824
7AZS|1|23SB|G|825
7AZS|1|23SB|A|826
*
7AZS|1|23SB|U|836
7AZS|1|23SB|A|837
7AZS|1|23SB|A|838
7AZS|1|23SB|C|839
7AZS|1|23SB|C|840
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L22B
- 50S ribosomal protein L22
- Chain L2B
- 50S ribosomal protein L2
- Chain L34B
- 50S ribosomal protein L34
- Chain L4B
- 50S ribosomal protein L4
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