IL_7AZS_250

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_250 not in the Motif Atlas

Geometric match to IL_7A0S_022

Geometric discrepancy: 0.0867

The information below is about IL_7A0S_022

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

7AZS|1|23SB|C|886
7AZS|1|23SB|C|887
*
7AZS|1|23SB|G|987
7AZS|1|23SB|A|988
7AZS|1|23SB|G|989

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L15B

50S ribosomal protein L15

Chain L35B

50S ribosomal protein L35