IL_7AZS_287

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAA*UCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZS_287 not in the Motif Atlas

Geometric match to IL_7RQB_065

Geometric discrepancy: 0.0708

The information below is about IL_7RQB_065

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

7AZS|1|23SB|C|1713
7AZS|1|23SB|A|1714
7AZS|1|23SB|A|1715
*
7AZS|1|23SB|U|2020
7AZS|1|23SB|C|2021
7AZS|1|23SB|G|2022

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L14B

50S ribosomal protein L14

Chain L19B

50S ribosomal protein L19

Chain L3B

50S ribosomal protein L3