IL_7AZS_348
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7AZS|1|16SA|U|1787
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_348 not in the Motif Atlas
- Geometric match to IL_4LFB_050
- Geometric discrepancy: 0.1786
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SA|C|1786
7AZS|1|16SA|U|1787
7AZS|1|16SA|G|1788
7AZS|1|16SA|C|1789
*
7AZS|1|16SA|G|1802
7AZS|1|16SA|A|1803
7AZS|1|16SA|G|1804
7AZS|1|16SA|G|1805
7AZS|1|16SA|A|1806
7AZS|1|16SA|A|1807
7AZS|1|16SA|G|1808
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S2A
- 30S ribosomal protein S2
- Chain S9A
- 30S ribosomal protein S9
Coloring options: