IL_7AZS_361
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- (5MC)AC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_361 not in the Motif Atlas
- Homologous match to IL_4LFB_070
- Geometric discrepancy: 0.3336
- The information below is about IL_4LFB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29925.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
7AZS|1|16SB|5MC|2035
7AZS|1|16SB|A|2036
7AZS|1|16SB|C|2037
*
7AZS|1|16SB|G|2114
7AZS|1|16SB|A|2115
7AZS|1|16SB|A|2116
7AZS|1|16SB|G|2117
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain ASIB
- Transfer RNA; tRNA
- Chain MRNB
- mRNA
- Chain S12B
- 30S ribosomal protein S12
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