IL_7AZY_009

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7AZY|1|E|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_009 not in the Motif Atlas

Homologous match to IL_5TBW_010

Geometric discrepancy: 0.3744

The information below is about IL_5TBW_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37379.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

7AZY|1|E|U|169
7AZY|1|E|G|170
*
7AZY|1|E|U|248
7AZY|1|E|U|249
7AZY|1|E|U|250
7AZY|1|E|G|251
7AZY|1|E|U|252
7AZY|1|E|A|253

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain D

60S ribosomal protein L35-A

Chain b

60S ribosomal protein L8-A

Chain k

60S ribosomal protein L13-A